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| Research ID | Study Title | Release Date | Type of Study | Platform |
Participants/Materials (Ethnicity) | Data Provider | Type of Data |
|---|---|---|---|---|---|---|---|
|
JGAS00000000002 |
Sequence Data of a SCA31 Patient |
v1:2013/12/01 |
Single Patient NGS (WGS) |
Illumina (HiSeq 2000) |
1 Patient (Japanese) |
Shinichi Morishita |
Controlled-Access (Type I) |
|
JGAS00000000001 |
Molecular Epidemiological Study of Somatic Mutation Profiles of EGFR Mutation Positive Lung Adenocarcinoma |
v1:2014/07/11 |
NGS (Exome) |
Illumina (GAIIx) |
97 Patients (Japanese) |
Koichi Goto |
Controlled-Access (Type I) |
|
DRA001273 JGAS00000000032 DRA003791 JGAS00000000093 |
Genetic Analysis of Hearing Loss and Its Clinical Application |
v1:2014/01/27 v2:2017/02/24 v3:2017/06/19 |
NGS (Target Capture) |
Life technoligies (Ion PGM) |
17 UsherSyndrome patients 63 Non-syndromic hearing loss patients (Japanese) |
Shin-ichi Usami |
Un-restricted Access Controlled-Access (Type I) |
|
JGAS00000000004 JGAS00000000106 |
Genomic and Genetic Analysis of Brain Tumors and Analysis of Their Clinicopathological Significance |
v1:2014/01/31 v2:2017/06/05 v3:2017/09/01 |
NGS (Exome, RNA-seq) Methylation array |
Illumina (HiSeq 2000, HumanMethlyation450) |
6 astrocytomas 16 oligodendrogliomas gliomas (17 cerebellar gliomas, 8 cerebral glioblastomas and 14 thalamic gliomas) (Japanese) |
Nobuhito Saito (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000005 |
Gene Expression of Human Th17 Cells Before and After Activation |
v1:2015/02/12 |
NGS (RNA-seq) |
Applied BioSystems (AB5500 GA) |
1 Participant (4 Samples) (Japanese) |
Sanju Iwamoto |
Controlled-Access (Type I) |
|
DRA003802 |
DNA Methylation Analysis of Early Human Embryos |
v1:2014/12/24 v2:2015/01/07 v3:2015/08/03 |
NGS (PBAT) |
Illumina (HiSeq 2000/2500) |
11 Libraries (Japanese) |
Takahiro Arima |
Un-restricted Access |
|
JGAS00000000008 |
Research for candidate genes of splenic epidermoid cyst. |
v1:2015/06/17 |
NGS (Exome) |
Illumina (HiSeq 2000) |
8 Splenic epidermoid cysts (Japanese) |
Hiroshi Matsufuji |
Controlled-Access (Type I) |
|
JGAS00000000015 |
Integrated hepatitis B virus is epigenomically regulated by the methylation status of the human genome |
v1:2015/10/07 |
NGS (Target Capture) |
Roche GS FLX Titanium |
2 Cell lines 8 HB-HCC primary tissues (Japanese) |
Hiroyuki Yamamoto |
Controlled-Access (Type I) |
|
JGAS00000000012 |
Nagahama Zero-ji Preventive Cohort Project |
v1:2015/08/19 |
SNP-chip Control Set Cohort |
Illumina (Human610-Quad, HumanOmni2.5-4/2.5-8/2.5S-8, HumanExome-12, HumanCoreExome-12) |
3712 Participants (Japanese) |
Fumihiko Matsuda |
Controlled-Access (Type I) |
|
Japan PGx Data Science Consortium Database |
v1:2014/10/16 |
SNP-chip Control Set |
Illumina (HumanOmni2.5-8) |
2994 Participants (Japanese) |
Koji Suematsu |
Un-restricted Access |
|
|
JGAS00000000101 JGAS00000000114 |
Bio Bank Japan project |
v1:2014/09/30 v2:2015/12/28 v3:2016/01/28 v4:2016/02/02 v5:2017/05/18 v6:2017/09/08 |
SNP-chip Case-Control |
Illumina (Human610-Quad, HumanHap550v3, HumanOmniExpress-12, HumanExome, OmniExpressExome) Perlegen Sciences (high-density oligonucleotide arrays) Hologic Japan (Invader) |
1666 MIs and 3198 ctrls 934 ctrls (JSNP) 35 diseases (JSNP) 182 esophageal cancers (JSNP) 92 ALSs (JSNP) 9817 T2DMs and 6763 ctrls 5646 T2DMs and 19,420 ctrls 1472 ADs and 7966 ctrls 8180 AFs and 28,612 ctrls 158,284 individuals for BMI study 182,505 individuals' genotype data (Japanese) |
Michiaki Kubo |
Un-restricted Access Controlled-Access (Type I) |
|
Construction of the Whole-genome Reference Panel of 1070 Japanese Individuals |
v1:2014/10/14 |
NGS (WGS) |
Illumina (HiSeq 2500) |
1070 Participants (Japanese) |
Masayuki Yamamoto (ToMMo) |
Un-restricted Access |
|
|
DRA002604 |
Epigenome analysis of proteins expressed in human testis |
v1:2016/09/30 |
NGS (ChIP-seq, RNA-seq) |
Illumina (HiSeq 1500) |
1 Participant (4 Samples) (Japanese) |
Yasuyuki Ohkawa |
Un-restricted Access |
|
JGAS00000000021 |
Exome sequencing of primary central nervous system lymphoma |
v1:2016/02/22 |
NGS (Exome, RNA-seq) |
Illumina (HiSeq 2000) |
41 PCNSLs (Japanese) |
Hiroyuki Mano |
Controlled-Access (Type I) |
|
JGAS00000000009 |
Genetic analysis in neurodegenerative disorders |
v1:2015/02/03 |
NGS (Exome) |
Illumina (HiSeq 2000) |
14 MSAs and 7 Controls (Japanese) |
Shoji Tsuji |
Controlled-Access (Type I) |
|
JGAS00000000011 |
Systematic identification of long non-coding RNAs potentially involved in gastrointestinal cancer |
v1:2015/04/01 |
NGS (RNA-seq) Tumor vs. Matched-Normal |
Illumina (HiSeq 2500) |
17 GICs (32 Samples) (Japanese) |
Yasuhisa Shinomura (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000013 |
Genetic Analysis in Amyotrophic Lateral Sclerosis |
v1:2015/01/08 |
NGS (Exome) |
Illumina (HiSeq 2000) |
11 ALSs (Japanese) |
Fumiaki Tanaka (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000014 |
Genetic Analysis in Psychiatric Disorders |
v1:2015/01/08 |
NGS (Exome) |
Illumina (HiSeq 2000) |
Healthy Monozygotic Twins 3 Pairs [6 Participants] (Japanese) |
Tadafumi Kato (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000017 |
Analysis of the Molecular Mechanism for Developing Donor-Origin Leukemia after Allogeneic Stem Cell Transplantation. |
v1:2015/02/02 |
NGS (Exome) |
Illumina (HiSeq 2000) |
1 DCL (5 Samples from Each Stage) 1 Donor (Japanese) |
Hitoshi Kiyoi (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000016 |
Genetic Analysis in Lifestyle-Related Disease, Arteriosclerotic Disease, and Aging-Related Diseases |
v1:2015/01/31 |
NGS (Exome) |
Illumina (HiSeq 2000) |
30 Hypertensions (Japanese) |
Tetsurou Miki (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000023 |
Comprehensive Analysis of Genetic Alterations in Hematological Malignancies |
v1:2015/04/16 |
NGS (Exome) |
Illumina (GAIIx, Hiseq 2000/2500) |
13 MDSs and 1 CMML (Japanese) |
Seishi Ogawa (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000024 JGAS00000000040 |
Identification of genetic polymorphism on aggressive periodontitis |
v1:2016/07/28 |
NGS (Exome) |
Illumina (HiSeq 2000) |
Periodontitis patients (Japanese) |
Shinya Murakami |
Controlled-Access (Type I) |
|
JGAS00000000018 |
Biobank Japan Project |
v1:2015/06/02 |
SNP-chip |
Illumina (HumanOmniExpress BeadChip, HumanExome BeadChip, ImmunoChip, HumanHap550v3 Genotyping BeadChip) |
908 Participants (Japanese) |
Michiaki Kubo (BBJ) |
Controlled-Access (Type I) |
|
Study of Genome Polymorphism/Variation on Stevens-Johnson Syndrome |
v1:2016/03/09 |
SNP-chip Case-Control |
Affymetrix (Axiom ASI) |
117 SJSs and 691 controls (Japanese) |
Mayumi Ueta (Genome Science) |
Un-restricted Access |
|
|
JGAS00000000022 |
The Molecular Biological Analysis about Occurrence and Malignant Transformation in gynecological carcinogenesis |
v1:2015/04/01 |
SNP-chip CNV Analysis |
Affymetrix (Human Mapping 250K Nsp Array) |
57 OvarianCarcinomas (Japanese) |
Katsutoshi Oda (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000042 |
Constructing database of magnetic resonance imaging of the brain and the ancillary clinical information for multisite collaboration studies |
v1:2015/11/20 |
Neuroimage Clinical Info |
Philips (Achieva) |
129 normal controls, 37 schizophrenia, 8 unipolar and 2 bipolar disorders (Japanese) |
Kiyoto Kasai |
Controlled-Access (Type I) |
|
JGAS00000000026 JGAS00000000027 JGAS00000000028 |
Standard epigenome mapping in human epithelial cells of the digestive and urogenital organs (HPC series) |
v1:2016/07/22 |
NGS (WGBS ChIP-seq RNA-seq) |
Illumina (HiSeq 2000/2500) |
8 partial hepatectomy specimens (Japanese) |
Yae Kanai (IHEC) |
Controlled-Access (Type I) |
|
DRA003516 |
Functional analysis of two types of exosome in human whole saliva |
v1:2015/05/01 |
NGS (RNA-seq) |
Illumina (GAIIx) |
1 Participant (3 Samples) (Japanese) |
Ryohei Yanoshita |
Un-restricted Access |
|
JGAS00000000037 |
Identification of novel therapeutic targets of small cell lung cancer by comprehensive genomic analyses |
v1:2015/10/01 |
NGS (Exome) |
Illumina (HiSeq 2000) |
51 SCLCs (Japanese) |
Koichi Goto (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000036 |
Genome wide analysis of gene mutations in solid tumors |
v1:2015/09/16 |
NGS (Exome) |
Illumina (HiSeq 2000/2500) |
16 RMSs and 7 PPBs (Japanese) |
Junko Takita (P-DIRECT) |
Controlled-Access (Type I) |
|
DRA003736 |
Performance Comparison of Four Commercial Human Whole-Exome Capture Platforms |
v1:2015/08/01 |
NGS (Exome) Platform comparison |
Illumina (HiSeq 2500) |
2 HapMap-JPT samples (Japanese) |
Michiaki Kubo |
Un-restricted Access |
|
JGAS00000000035 |
Diagnostic feasibility study for pathological prediction with rheumatoid arthritis-susceptible genes and genomic regions identified by the association analysis using microsatelite markers |
v1:2015/09/24 |
NGS (Exome) |
Illumina (HiSeq 2000) |
39 RAs 10 Controls (pooled) (Japanese) |
Shigeki Mitsunagai (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000041 |
Genetic analysis in an inherited cardiac arrhythmia |
v1:2015/11/18 |
NGS (Exome) |
Illumina (HiSeq 2500) |
11 Patients with an inherited cardiac arrhythmia (Japanese) |
Naomasa Makita (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000039 |
Analysis of TKI resistant mechanism for gastrointstinal stromal tumor (GIST) |
v1:2016/12/27 |
NGS (Exome) |
Illumina (HiSeq 1500) |
4 Imatinib resistant GIST |
Tsuyoshi Takahashi |
Controlled-Access (Type I) |
|
JGAS00000000038 |
Epigenomic analysis of the human placenta |
v1:2016/09/16 |
NGS (WGS, Exome, RNA-seq, BS-seq) |
Illumina (HiSeq 2500) |
28 human placenta 26 maternal blood samples |
Takahiro Arima (IHEC) |
Controlled-Access (Type I) |
|
JGAS00000000052 |
Research of factors related to diagnosis, progression, prognosis and treatment of hepato-biliary-pancreatic malignancies |
v1:2017/01/12 |
NGS (Exome, Target Capture) |
Illumina (HiSeq 2000) |
33 primary HCC (Japanese) |
Shinji Tanaka (P-DIRECT) |
Controlled-Access (Type I) |
|
Genome analysis for elucidation of genetic factors in orofacial traits and diseases |
v1:2016/03/02 |
NGS (WGS) |
Illumina (HumanOmniExpress BeadChip) |
146 TMJ and 374 controls 149 third molar agenesis and 338 controls (Japanese, Korean) |
Tetsutarou Yamaguchi (Genome Science) |
Controlled-Access (Type I) |
|
|
JGAS00000000051 |
Japanese Alzheimer's disease neuroimaging initiative (J-ADNI) |
v1:2016/01/29 |
Neuroimage Clinical Info |
234 MCI 154 AD 149 healthly controls (Japanese) |
Takeshi Iwatsubo |
Controlled-Access (Type I) Un-restricted Access |
|
|
JGAS00000000047 |
Transcriptome analysis of acute lymphoblastic leukemia in adolescents and young adults |
v1:2016/03/29 |
NGS (RNA-seq) |
Illumina (HiSeq 2000/2500) |
99 Ph(-) ALL 3 Ph(+) ALL 5 cell lines 8 normal hematopoietic cells (Japanese) |
Hiroyuki Mano (P-DIRECT) |
Controlled-Access (Type I) |
|
DRA004251 |
Whole exome sequencing on ampullary carcinomas |
v1:2016/02/05 |
NGS (Exome) |
Illumina (HiSeq 2000/2500) |
60 Patients with ampullary cancer (28 Japanese patients and 32 American patients) |
Shinich Yachida |
Un-restricted Access |
|
JGAS00000000053 |
Transcriptome analysis of Hepatitis B for drug discovery and clinical applications |
v1:2016/09/30 |
NGS (CAGE-seq) |
Illumina (HiSeq 2000) |
8 HBV (Genotype C) positive patients (Japanese) |
Tomokazu Matsuura |
Controlled-Access (Type I) |
|
JGAS00000000062 |
Identification of new molecular targets with profiling of malignant mesothelioma |
v1:2016/07/20 |
NGS (Exome) |
Illumina (HiSeq 2000/2500) |
38 malignant mesothelioma (Japanese) |
Takashi Nakano (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000059 |
Genetic and epigentic analysis of non-alcoholic fatty liver disease |
v1:2017/02/20 |
NGS (RNA-seq) |
Illumina (HiSeq 2500) |
60 NAFLD patients (Japanese) |
Kikuko Hotta (Genome Science) |
Controlled-Access (Type I) |
|
JGAS00000000057 |
Searching causative genes of familial tumors using whole genome / exome sequencing |
v1:2017/02/20 |
NGS (Exome) |
Illumina (HiSeq 2000) |
Siblings developed multiple primary lung cancers (Japanese) |
Kikuya Kato |
Controlled-Access (Type I) |
|
JGAS00000000061 |
Construction of Geriatric Oncology Database for establishment of the Treatment Algorithm: Clinical Data and Questionnaire Survey Results in JapaneseElderly Cancer Patients Retrospective study |
v1:2016/08/26 |
Direct sequencing TaqMan qRT-PCR COBRA cDNA microarray Clinical data Treatment data |
GA 3130 LightCycler 480II Whole Human Genome Microarray 4x44K |
[GENOME] 106 colorectal cancer 62 gastric cancer 173 lung cancer [Retrospective] 313 colorectal cancer 166 gastric cancer 344 lung cancer 300 diabetes and nephropathy 357 cardiovascular disorder 49 respiratory dysfunction (Japanese) |
Masahiko Nishiyama |
Controlled-Access (Type I) |
|
JGAS00000000076 |
Project for Development of Innovative Research on Cancer Therapeutics; identifiying the predictive factors for response to chemoherapy in ovarian cancer |
v1:2017/05/18 |
NGS (Exome) |
Illumina (HiSeq 2000) |
55 ovarian clear cell carcinoma patients (Japanese) |
Toru Sugiyama (P-DIRECT) |
Controlled-Access (Type I) |
|
JGAS00000000065 |
Cancer genomics for elucidation of molecular mechanisms of carcinogenecis and progression in lung cancer |
v1:2017/07/10 |
NGS (PCR amplicon Seq) |
Nanopore (MinION) |
8 lung adenocarcinoma patients (Japanese) |
Takashi Kono |
Controlled-Access (Type I) |
|
JGAS00000000064 |
RNA expression profiling of neuromuscular diseases and viral diseases |
v1:2016/12/09 |
NGS (small RNA-seq) |
Illumina (HiSeq 2500) |
3 Neuromuscular disease (control group) (Japanese) |
Takanori Yokota |
Controlled-Access (Type I) |
|
Genome-wide search for susceptibility genes to primary biliary chirrosis |
v1:2016/10/05 |
SNP-chip |
Affymetrix (Axiom ASI) |
487 PBCs 476 controls |
Minoru Nakamura |
Unrestricted-access |
|
|
JGAS00000000070 |
Genome-wide analysis for biomarker exploration |
v1:2016/10/28 |
NGS (CAGE-seq) |
Illumina (HiSeq 2500) |
97 lung cancer tissues |
Yoshihide Hayashizaki |
Controlled-Access (Type I) |
|
JGAS00000000078 JGAS00000000079 JGAS00000000080 |
Study of molecular-genetics, and molecular epidemiology for developing treatment of esophageal cancer (COC series) |
v1:2016/11/18 |
NGS (WGBS ChIP-seq RNA-seq) |
Illumina (HiSeq 2000/2500) |
12 normal human absorptive epithelial cells (Japanese) |
Yae Kanai (IHEC) |
Controlled-Access (Type I) |
|
JGAS00000000095 |
Genomic and epigenomic analysis of different types of cancer |
v1:2017/09/04 |
NGS (WGS, Exome, RNA-seq) |
Illumina (HiSeq 2000/2500) |
68 breast cancer patients (Japanese) |
Hiroyuki Mano |
Controlled-Access (Type I) |
|
JGAS00000000090 |
Comprehensive analysis of genetic alterations in hematological malignancies |
v1:2017/05/25 |
NGS (RNA-seq) |
Illumina (HiSeq 2500) |
123 pediatric T-ALL patients (Japanese) |
Junko Takita |
Controlled-Access (Type I) |
|
JGAS00000000085 |
Expression quantitative trait loci analysis using human immune cells |
v1:2017/04/24 |
RNA-seq SNP-chip |
Illumina (Hiseq 2500, Infinium OmniExpressExome BeadChips) |
105 healthy volunteers (Japanese) |
Kazuhiko Yamamoto |
Unrestricted-access Controlled-Access (Type I) |
|
JGAS00000000111 |
Search for new susceptibility genetic factors associated with psychiatric disorders |
v1:2017/06/26 |
Methylation array |
Illumina (Infinium HumanMethylation450) |
48 panic disorder patients 48 healthy controls (Japanese) |
Katsushi Tokunaga |
Controlled-Access (Type I) |
|
JGAS00000000103 |
Analysis of gastric cancer genome and its clinicopathological significance |
v1:2017/07/31 |
NGS (RNA-seq, Amplicon-seq) |
Illumina (HiSeq 2000, MiSeq) |
30 diffuse-type gastric carcinomas (Japanese) |
Shumpei Ishikawa |
Controlled-Access (Type I) |
# You can search the data in the European Sequence Read Archive (ERA) and the Sequence Read Archive (SRA) through the DDBJ Sequence Read Archive (DRA) site.
# You can also search the data in SRA through the Database Center for Life Science (DBCLS) SRA web site.
